nipoppy.cli.pipeline_catalog

Define CLI for the Nipoppy pipeline catalog.

Module Contents

nipoppy.cli.pipeline_catalog.pipeline()

Pipeline store operations.

nipoppy.cli.pipeline_catalog.pipeline_create(**params)

Create a template pipeline config directory.

nipoppy.cli.pipeline_catalog.pipeline_install(**params)

Install a new pipeline into a dataset.

The source of the pipeline can be a local directory or a Zenodo ID.

nipoppy.cli.pipeline_catalog.pipeline_list(**params)

List installed pipelines for a dataset.

Search for available pipelines on Zenodo.

nipoppy.cli.pipeline_catalog.pipeline_upload(**params)

Upload a pipeline config directory to Zenodo.

nipoppy.cli.pipeline_catalog.pipeline_validate(**params)

Validate a pipeline config directory.

nipoppy.cli.pipeline_catalog.zenodo_options(func)

Define Zenodo options for the CLI.